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File Server CPU at 100% MSMPEngine, Trusted Installer, mscorsvw.exe, System Idle

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Environment:
Windows 2008R2 SP1 File Server
Xeon E5630 @ 2.53GHz CPU
4GB RAM
This fileserver is a Hyper-V VM. The host machine's CPU runs at a constant 0-4%. The other VMs are running fine. 
We are a school district that is out for summer break. There are only about 10 users on our network currently. 

The following process are constantly taking turns running between 80% and 94% - Trusted Installer, mscorsvw.exe, System Idle. When a certain process is not the one running at 80+% it's running at 6% to 20% taking up the rest of the CPU causing the CPU to run at constant 100%. 

I keep Windows updates current. I'm currently running a full scan with System Center 2012 Endpoint Protection and Windows Malicious Software Removal Tool. Both were updated today. 

I added another core to the VM. It is now peaking at about 85%. 


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